This page contains updated data regarding recent segmental duplications in c.elegans genome assembly c4 Jan. 2007.   It focuses on genomic duplications >1000bp and >90% identity.

Data Access

This allows browsing of the genome.

Inter and Intra chromosome duplications from the perspective of individual scaffolds. The assembly duplications (red and blue for inter and intra chromosome respectively) are shown at various length thresholds.  

Analysis on various KB-Group Breakdowns 

Analysis on distribution of number of pairs at different length categories. 

Analysis on distribution of number of pairs at different Percent Similarity. 

Histograph shows the non redundant Seq Dup distribution on each chromosomes. 

Histograph show the Seg Dup ratio on each chromosome 

Histograph of total Seg Dup and Chromosome length for each chromosome 

Will come , it is only a sample now. Length vs Identity scatter plot. 

Will Come. It is only a sample now. Kimura vs Identity scatter plot. 

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