| inter pairs is 105928 | ||||||||||||
| intra pairs is 23626 | ||||||||||||
| Count | Average Length | Average Identity | Sum of Bases | |||||||||
| size | inter | intra | Total | inter | intra | both | inter | intra | both | inter | intra | both |
| 1.kb | 70878 | 7189 | 78067 | 1338.00 | 1407.00 | 1373.02 | 92.78% | 94.50% | 93.64% | 189515466 | 20290116 | 209805582 |
| 2.kb | 20648 | 3937 | 24585 | 2393.96 | 2445.59 | 2419.78 | 93.19% | 95.14% | 94.17% | 99375016 | 19259608 | 118634624 |
| 3.kb | 4857 | 2265 | 7122 | 3324.55 | 3463.36 | 3393.95 | 94.16% | 95.35% | 94.75% | 31810764 | 15645973 | 47456737 |
| 4.kb | 1462 | 1446 | 2908 | 4503.46 | 4495.43 | 4499.45 | 97.68% | 95.45% | 96.56% | 12999957 | 13063934 | 26063891 |
| 5.kb | 1295 | 1114 | 2409 | 5474.09 | 5471.90 | 5473.00 | 97.78% | 96.02% | 96.90% | 14539201 | 12302891 | 26842092 |
| 6.kb | 1138 | 962 | 2100 | 6469.94 | 6504.79 | 6487.36 | 98.06% | 96.03% | 97.04% | 14351388 | 12689364 | 27040752 |
| 7.kb | 891 | 782 | 1673 | 7480.91 | 7487.28 | 7484.10 | 98.26% | 96.40% | 97.33% | 13447846 | 11592954 | 25040800 |
| 8.kb | 741 | 609 | 1350 | 8483.00 | 8501.12 | 8492.06 | 97.84% | 96.42% | 97.13% | 12377965 | 10275628 | 22653593 |
| 9.kb | 561 | 579 | 1140 | 9491.01 | 9471.33 | 9481.17 | 97.47% | 96.01% | 96.74% | 10675667 | 10711755 | 21387422 |
| 10.kb | 2254 | 2832 | 5086 | 13372.02 | 14019.40 | 13695.71 | 97.01% | 96.53% | 96.77% | 60286951 | 79070712 | 139357663 |
| 20.kb | 604 | 1024 | 1628 | 24224.95 | 24388.91 | 24306.93 | 96.78% | 97.33% | 97.05% | 30081663 | 50095999 | 80177662 |
| 30.kb | 274 | 425 | 699 | 34502.44 | 34618.68 | 34560.56 | 96.77% | 97.67% | 97.22% | 18517090 | 28552156 | 47069246 |
| 40.kb | 134 | 205 | 339 | 44901.92 | 44380.05 | 44640.99 | 96.90% | 97.89% | 97.39% | 12347586 | 18659536 | 31007122 |
| 50.kb | 156 | 255 | 411 | 72113.85 | 66903.67 | 69508.76 | 97.73% | 97.98% | 97.86% | 22652313 | 33521918 | 56174231 |
| 542978873 | 335732544 | 878711417 | ||||||||||
| Total non redundant dup space(bp) | ||||||||||||
| inter | 184,516,948 | |||||||||||
| intra | 180,381,012 | |||||||||||
| both | 327,945,145 | |||||||||||
| Number of Aligments | ||||||||||||
| Weilding(joins) | 129554 | |||||||||||
| w/o Weilding(Pieces) | 130659 | |||||||||||
| Genome Length | ||||||||||||
| Chrom | with gap | without gap | ||||||||||
| Chr1 | 161106243 | 149879974 | ||||||||||
| Chr10 | 106383598 | 100646118 | ||||||||||
| Chr11 | 110171769 | 103790434 | ||||||||||
| Chr12 | 85358539 | 80721495 | ||||||||||
| Chr13 | 84419198 | 79738345 | ||||||||||
| Chr14 | 81345643 | 77184223 | ||||||||||
| Chr15 | 84633453 | 78983514 | ||||||||||
| Chr16 | 77906053 | 72397696 | ||||||||||
| Chr17 | 76506943 | 71054624 | ||||||||||
| Chr18 | 66141439 | 61144223 | ||||||||||
| Chr19 | 65312493 | 60943184 | ||||||||||
| Chr2 | 140800416 | 132903960 | ||||||||||
| Chr20 | 75796353 | 70791417 | ||||||||||
| Chr21 | 69173390 | 64994640 | ||||||||||
| Chr22 | 61848140 | 58629916 | ||||||||||
| Chr23 | 53376148 | 50174891 | ||||||||||
| Chr24 | 65020233 | 61258391 | ||||||||||
| Chr25 | 44060403 | 41359283 | ||||||||||
| Chr26 | 51750746 | 48251159 | ||||||||||
| Chr27 | 48749334 | 45320167 | ||||||||||
| Chr28 | 46084206 | 43135603 | ||||||||||
| Chr29 | 51998940 | 47840066 | ||||||||||
| Chr3 | 127923604 | 119427898 | ||||||||||
| Chr4 | 124454208 | 117769821 | ||||||||||
| Chr5 | 125847759 | 117666017 | ||||||||||
| Chr6 | 122561022 | 113073939 | ||||||||||
| Chr7 | 112078216 | 105398941 | ||||||||||
| Chr8 | 116942821 | 108392136 | ||||||||||
| Chr9 | 108145351 | 101516662 | ||||||||||
| ChrUn | 283544868 | 264840438 | note: the total length of cancatenated chrUnAll is 402224868 | |||||||||
| ChrX | 88516663 | 82567723 | ||||||||||
| TOTAL | 2917958192 | 2731796898 | ||||||||||