inter pairs is 80770
intra pairs is 71268
    Count     Average Length   Average Identity   Sum of Bases
size inter intra both inter intra both inter intra both inter intra both
1.kb 46978 52854 99832 1465 1415 1440 96.17% 96.04% 96.11% 68805325 74792950 143598275
2.kb 13885 8409 22294 2393 2367 2380 96.14% 95.65% 95.89% 33223919 19902247 53126166
3.kb 4755 2544 7299 3436 3431 3433 95.38% 95.33% 95.36% 16336169 8729081 25065250
4.kb 2652 1402 4054 4488 4485 4486 95.38% 95.52% 95.45% 11901721 6287827 18189548
5.kb 2146 1027 3173 5496 5472 5484 95.33% 95.48% 95.40% 11794666 5619570 17414236
6.kb 1638 770 2408 6484 6483 6483 95.15% 95.40% 95.28% 10620453 4991543 15611996
7.kb 1454 641 2095 7471 7514 7493 95.06% 95.22% 95.14% 10862975 4816706 15679681
8.kb 1117 493 1610 8503 8469 8486 95.18% 95.31% 95.25% 9497336 4175260 13672596
9.kb 1012 449 1461 9473 9490 9482 95.25% 95.24% 95.25% 9586933 4261011 13847944
10.kb 3865 1884 5749 13668 13566 13617 95.07% 94.73% 94.90% 52826738 25558914 78385652
20.kb 781 444 1225 23946 23684 23815 95.10% 94.51% 94.81% 18701713 10515582 29217295
30.kb 275 107 382 33862 34115 33989 95.21% 95.98% 95.60% 9312099 3650343 12962442
40.kb 87 41 128 44289 44569 44429 95.71% 96.33% 96.02% 3853164 1827312 5680476
50.kb 112 181 293 68966 141296 105131 95.98% 97.92% 96.95% 7724245 25574530 33298775
Total non redundant dup space (bp)
inter 153,990,608
intra 119,469,683
both 273,460,291
Number of aligment
weilding (joins) 152,041
w/o weilding(pieces) 164,050
chr Genome Length Genome Length without Gap
       
chr1 229974691 217189828
chr10 135001995 125696632
chr10_random 8402541 7450389
chr11 134204764 123596673
chr11_random 8412303 7959665
chr12 135371336 129867978
chr12_random 2259969 2034830
chr13 115868456 87794816
chr13_random 9231045 8927083
chr14 107349158 86251426
chr14_random 2108736 1914581
chr15 100063422 76971999
chr15_random 3087076 2872705
chr16 90682376 74505725
chr16_random 6370548 5756616
chr17 83384210 73429819
chr17_random 5078517 4743268
chr18 77261746 74181105
chr18_random 1841920 1659862
chr19 64473437 51997110
chr19_random 2407237 2072052
chr1_random 9420409 8583016
chr20 62293572 58102112
chr20_random 1792361 1629219
chr21 46489110 32706069
chr22 50165558 32341198
chr22_random 1182457 1076852
chr2a 114460064 105873480
chr2a_random 3052259 2805000
chr2b 248603653 127869144
chr2b_random 2186977 1964045
chr3 203962478 194962703
chr3_random 3517036 3198212
chr4 194897272 186955713
chr4_random 6711082 6035997
chr5 183994906 175225382
chr5_random 3159943 2857144
chr6 173908612 164697716
chr6_random 9388360 8806714
chr7 160261443 151069649
chr7_random 7240870 6607144
chr8 145085868 138151035
chr8_random 7291619 6889143
chr9 138509991 109295998
chr9_random 7733331 7045129
chrUn 58616431 50413493
chrX 155361357 130929871
chrX_random 3548706 2795267
chrY 23952694 22691222
chrY_random 772887   771987