chrom	chromStart	chromEnd	name	type	appxLen
chr1	100000	250000	CTC-232B23	Loss	0
chr1	1567952	1678560	RP1-283E3	Loss	1.6
chr1	8455817	8599786	RP4-633I8	Gain	8.5
chr1	12750941	12935532	RP11-219C24	Gain	12.9
chr1	16388672	16506739	RP1-163M9	Loss	16.4
chr1	37369819	37482043	RP3-423B22	Loss	37.4
chr1	47937370	48108132	RP5-1024N4	Loss	47.9
chr1	56825000	56975000	RP6-65F20	Gain and Loss	56.9
chr1	67082589	67204878	RP11-131O15	Loss	67.1
chr1	82924367	83053834	RP4-601K24	Gain	82.9
chr1	95125000	95275000	RP11-335D10	Gain	95.2
chr1	103509179	103666401	RP11-259N12	Gain and Loss	103.5
chr1	112748770	112802172	RP4-580L15	Gain	112.7
chr1	171708656	171809152	AL021069.1	Gain	171.7
chr1	173270361	173429951	RP11-415M14	Gain	173.3
chr1	230340132	230491685	RP5-1016N21	Loss	230.3
chr1	245622688	245800556	RP11-438F14	Gain and Loss	245.6
chr10	43988295	44172754	RP11-20J15	Loss	44
chr10	46442959	46517990	AL390716.27	Gain	46.4
chr10	70853900	71009356	RP11-52K17	Gain	70.9
chr10	78295697	78445697	RP11-19C18	Loss	78.3
chr10	107436017	107600176	RP11-89G20	Gain	107.4
chr10	108813646	108982510	RP11-432B10	Gain	108.8
chr10	109760755	109919970	RP11-626C11	Gain	109.8
chr10	110562488	110693695	RP11-469M11	Gain	110.6
chr11	10157602	10317288	RP11-79E12	Gain and Loss	10.2
chr11	11689325	11836126	RP11-206L19	Loss	11.7
chr11	29378541	29488432	RP5-859D17	Gain	29.4
chr11	44886945	45036945	RP11-12C11	Gain	44.9
chr11	48652282	48808876	RP11-79A4	Gain and Loss	48.7
chr11	56376158	56525829	RP11-135H8	Gain	56.4
chr11	58475451	58637040	AP001636.4	Gain	58.5
chr11	62289643	62466849	RP11-49D19	Loss	62.3
chr11	78082899	78255478	RP11-7H7	Loss	78
chr11	84396015	84566091	RP11-19P3	Loss	84.3
chr11	89799234	89965790	RP11-30C9	Loss	89.8
chr11	95618106	95761141	RP11-16K5	Gain	95.7
chr11	102379840	102529840	RP11-33F6	Loss	102.5
chr11	103836055	103997514	RP11-179B7	Gain and Loss	103.8
chr11	112624441	112808846	RP11-79I17	Loss	112.6
chr11	114345167	114436226	AP003463.2	Loss	114.3
chr11	115863283	116073866	RP11-356E17	Loss	115.9
chr11	130825000	130975000	RP1-26N8	Loss	130.9
chr12	3099612	3265128	RP11-543P15	Loss	3.1
chr12	20833481	21009087	RP11-80N2	Loss	20.8
chr12	22210386	22369559	RP11-12D15	Loss	22.3
chr12	54825000	54975000	RP11-183H16	Gain and Loss	54.9
chr12	87352897	87525143	RP11-900F13	Loss	87.4
chr12	110916217	111092885	RP11-90D13	Gain	110.9
chr13	19125000	19275000	RP11-26D3	Gain and Loss	19.2
chr13	46969306	47142971	RP11-90K7	Gain and Loss	47
chr13	55500596	55629949	RP11-100C24	Gain and Loss	55.6
chr13	62806453	62956453	RP11-37I8	Gain and Loss	63
chr13	79103303	79267022	RP11-80N10	Loss	79.1
chr13	81311998	81476851	RP11-89A14	Loss	81.3
chr13	91849384	92016618	RP11-80B16	Loss	91.8
chr14	19711292	19861292	RP11-71E6	Gain	19.8
chr14	27501865	27688425	RP11-125A5	Gain and Loss	27.5
chr14	33325110	33511880	RP11-26M6	Gain and Loss	33.3
chr14	38614819	38806906	RP11-88N14	Loss	38.6
chr14	79418007	79571049	RP11-114N19	Gain	79.4
chr14	99131211	99309297	RP11-90G22	Gain	99.1
chr14	101240164	101399766	RP11-365N19	Gain	101.2
chr14	101946148	102137711	RP11-894P9	Gain	101.9
chr14	104725000	104875000	CTC-200D12	Loss	104.8
chr15	23333322	23500936	RP11-339C21	Loss	23.3
chr15	25525868	25713218	AC090696.6	Loss	25.5
chr15	30582890	30759585	RP11-420B6	Gain	30.6
chr15	31458411	31610000	AC011938.4	Gain and Loss	31.5
chr15	32326507	32476507	RP11-194H7	Loss	32.3
chr15	48101339	48259744	RP11-416K5	Gain	48.1
chr15	70535603	70725297	RP11-500O23	Loss	70.5
chr15	80842677	81011660	RP11-91O13	Loss	80.8
chr15	85342016	85489131	RP11-80J8	Loss	85.3
chr15	95762511	95912511	RP11-120N1	Loss	95.8
chr15	99825000	99975000	RP1-124O5	Gain and Loss	99.9
chr16	25000	175000	CTB-191K2	Gain	0.1
chr16	33714424	33928449	RP11-499D5	Gain and Loss	33.7
chr16	35512738	35713799	RP11-488I20	Gain and Loss	35.5
chr16	35699684	35850705	RP11-80F22	Gain and Loss	35.7
chr16	53046467	53234328	RP11-466N18	Gain	53
chr16	85681793	85831793	RP11-443M9	Gain	85.7
chr16	89810000	89960000	RP1-191P24	Loss	0
chr17	2440000	2470000	c197.2	Loss	2.5
chr17	2470000	2500000	c197.4	Loss	2.5
chr17	2500000	2530000	c197.9	Loss	2.5
chr17	11392564	11604011	RP11-385G5	Loss	11.4
chr17	39869010	40043660	RP11-29C11	Loss	39.9
chr17	41354650	41532068	RP11-266I24	Gain	41.4
chr17	45207155	45364136	RP11-79O18	Gain	45.2
chr17	47395499	47546526	RP11-110H20	Loss	47.4
chr17	51088275	51255874	RP11-42M14	Loss	51.1
chr17	62592212	62746843	RP11-89H15	Loss	62.6
chr17	68624775	68811388	RP11-300G13	Loss	68.6
chr17	77200532	77320454	AC099804.3	Loss	77.2
chr17	78402397	78562887	RP11-46E14	Loss	78.4
chr18	125000	275000	CTB-74G18	Loss	0.2
chr18	23452522	23596266	RP11-676D16	Loss	23.5
chr18	28140497	28292291	AC021224.7	Gain	28.1
chr18	37453946	37618543	RP11-89M10	Loss	37.5
chr18	51859132	52009132	RP11-160B24	Loss	51.9
chr18	68665322	68807421	RP11-90L15	Loss	68.7
chr19	8714331	8864039	RP11-79F15	Gain and Loss	8.7
chr19	49726611	49900195	RP11-21J15	Loss	49.7
chr2	35838603	36006621	RP11-119B15	Gain and Loss	35.9
chr2	61634657	61793531	RP11-355B11	Loss	61.6
chr2	81707951	81907518	RP11-89C12	Loss	81.7
chr2	105966603	106107186	AC010978.8	Gain	106
chr2	122958740	123178923	RP11-498O20	Gain	123
chr2	126542770	126736743	RP11-333J2	Gain	126.5
chr2	130794831	130960242	RP11-32C20	Gain and Loss	130.8
chr2	132491613	132665773	RP11-89B17	Gain and Loss	132.5
chr2	163904870	164104255	AC092632.2	Loss	163.9
chr2	171470978	171632130	RP11-80D14	Gain	171.5
chr2	173959159	174116047	RP11-91L23	Gain	174
chr2	190503277	190671168	RP11-270G18	Gain	190.5
chr2	220409457	220593082	RP11-316O14	Gain	220.4
chr2	241232015	241403435	RP11-463B12	Loss	241.2
chr2	243125000	243275000	RP5-1011O17	Gain and Loss	243.2
chr2	243365000	243515000	CTB-172I13	Gain and Loss	0
chr20	2264496	2380353	RP4-816K17	Gain	2.3
chr20	7715766	7835062	RP5-836E8	Gain	7.7
chr20	16770470	16943316	RP11-80N12	Loss	16.8
chr20	26118999	26228848	RP3-410C9	Loss	26.1
chr20	51969383	52080756	RP4-715N11	Gain	52
chr20	56149037	56327510	RP4-749H19	Gain	56.1
chr20	57801934	57925302	RP5-907D15	Gain	57.8
chr20	59428011	59584677	RP5-1043L13	Gain	59.4
chr21	19211404	19376024	RP11-375O2	Loss	19.2
chr21	20982315	21153633	RP11-49J9	Gain	21
chr21	22059721	22195086	RP11-64I12	Gain	22.1
chr21	35227770	35370377	RP11-17O20	Gain	35.2
chr21	43588189	43801738	RP11-88N2	Gain	43.6
chr22	22795270	22989794	RP11-76E8	Loss	22.8
chr22	30121562	30289672	RP11-247I13	Gain	30.1
chr22	34462906	34612906	RP11-89D12	Loss	34.5
chr22	40419177	40495904	RP5-821D11	Gain	40.4
chr22	49125000	49275000	RP1-99K24	Gain	49.2
chr3	60057147	60207147	RP11-34D21	Loss	60.2
chr3	120764690	120929783	RP11-169N13	Gain and Loss	120.8
chr3	141101588	141279673	RP11-89E16	Gain	141.1
chr3	153340485	153535919	RP11-362A9	Gain	153.3
chr3	165155787	165304651	RP11-79F11	Loss	165.2
chr3	168836685	168994300	RP11-91B7	Loss	168.8
chr3	178593780	178751221	RP11-114M1	Gain and Loss	178.6
chr3	183908006	184074090	RP11-102G2	Gain	183.9
chr3	197049171	197199171	RP11-313F11	Gain	197
chr3	198125000	198275000	RP1-196F4	Gain	198.2
chr4	34674501	34823905	RP11-81N11	Gain	34.7
chr4	71546856	71696856	RP11-121P15	Loss	71.7
chr4	92076790	92227041	RP11-451M10	Gain	92.1
chr4	104817750	104956873	RP11-26E14	Gain	104.8
chr4	112723910	112873910	RP11-18D18	Gain	112.7
chr4	125299528	125470886	RP11-728C8	Gain	125.3
chr4	155127214	155277214	RP11-119B13	Gain	155.1
chr4	161550308	161721972	RP11-81P7	Gain	161.6
chr4	163312243	163421270	AC096717.3	Loss	163.3
chr4	171819500	171983845	RP11-90E13	Gain	171.8
chr4	188218911	188368911	RP11-597P9	Loss	188.1
chr4	190725000	190875000	CTB-31J3	Loss	190.8
chr4	191325000	191475000	RP5-963K6	Gain and Loss	191.4
chr5	100000	250000	RP1-84C11	Loss	0
chr5	2225000	2375000	RP1-189N21	Loss	2.3
chr5	11123385	11300479	RP11-79G1	Gain	11.1
chr5	17465324	17625743	RP11-88L18	Gain and Loss	17.5
chr5	35831018	36001584	RP11-67N10	Gain	35.8
chr5	41246904	41396061	RP11-19F12	Loss	41.2
chr5	69580133	69735382	RP11-551B22	Gain and Loss	69.6
chr5	79930907	80111405	RP11-90A9	Loss	79.9
chr5	85492314	85635599	RP11-258M21	Loss	85.5
chr5	127225185	127376160	RP11-42M12	Gain	127.2
chr5	141079307	141244817	RP11-55M16	Loss	141.1
chr5	165311242	165474429	RP11-90C21	Loss	165.3
chr6	89701	213735	RP3-416J7	Gain and Loss	0.1
chr6	89701	213735	AL035696.14	Gain and Loss	0.1
chr6	5800621	5987503	RP3-380B8	Loss	5.8
chr6	9493540	9634249	RP1-103M22	Loss	9.5
chr6	23067427	23173387	RP1-209A6	Gain	23.1
chr6	26392026	26562027	AL021917.4	Loss	26.4
chr6	32897712	33046167	RP11-79J17	Loss	32.9
chr6	38338684	38437534	RP3-460D19	Gain and Loss	38.3
chr6	45973498	46097018	RP3-447E21	Loss	46
chr6	50846149	50964429	RP4-753D5	Gain	50.8
chr6	62175425	62240662	RP1-271N20	Gain and Loss	62.2
chr6	62478312	62577978	AL133459.9	Loss	62.5
chr6	64959215	65097424	RP3-442I1	Loss	65
chr6	66110749	66130346	RP5-819L10	Loss	66.1
chr6	67079723	67229723	RP11-80L16	Gain and Loss	67.1
chr6	69377565	69535769	RP1-46B1	Gain	69.4
chr6	71538976	71623276	RP1-104A17	Gain	71.5
chr6	73525850	73683634	RP11-374I18	Gain	73.5
chr6	98966604	99052194	RP3-453D15	Loss	99
chr6	109904390	110039469	RP1-70A9	Loss	109.9
chr6	124189397	124274161	RP3-329N18	Loss	124.2
chr6	128190969	128296437	RP3-480J14	Gain	128.2
chr6	146604084	146804401	RP1-69B13	Loss	146.6
chr7	857118	961403	AC091729.4	Loss	0.9
chr7	18475082	18650772	RP11-51L23	Gain	18.5
chr7	18476400	18562033	CITB-13P7	Gain	18.5
chr7	18750000	18780000	IIID10	Gain	18.8
chr7	18780000	18810000	IIID11	Gain and Loss	18.8
chr7	18810000	18840000	IIB11	Gain and Loss	18.8
chr7	18840000	18870000	IIIE1	Gain	18.9
chr7	18870000	18900000	cosIIIA9	Gain and Loss	18.9
chr7	18900000	18930000	IID9	Gain	18.9
chr7	18930000	18960000	IIIB3	Gain	18.9
chr7	18960000	18990000	IH3	Gain and Loss	19
chr7	61789564	61951493	RP11-45N18	Gain	61.8
chr7	82832504	82979623	RP11-90N9	Loss	82.8
chr7	86267866	86414751	RP11-91M13	Gain	86.3
chr7	101164184	101342086	RP11-80P24	Gain	101.2
chr7	112071204	112209841	RP11-89O20	Loss	112.1
chr7	134505471	134656330	RP11-140I14	Loss	134.5
chr7	143006905	143136260	AC004853.1	Loss	143
chr7	154017187	154179562	RP11-80J22	Loss	154
chr7	156989617	157182527	RP11-58F7	Loss	157
chr7	158225000	158375000	RP1-3K23	Gain	158.3
chr8	1517631	1645005	AC126333.7	Gain	1.5
chr8	4596113	4755793	RP11-1K11	Loss	4.6
chr8	16682665	16860497	RP11-90I3	Loss	16.7
chr8	30980212	31130212	RP11-139G9	Loss	31.1
chr8	42594538	42748603	RP11-89A4	Loss	42.6
chr8	80138352	80297429	RP11-15K1	Gain	80.1
chr8	86080748	86119598	RP11-90O15	Loss	86.1
chr8	86636354	86786354	RP11-96G1	Gain and Loss	86.7
chr8	104619688	104786953	RP11-79J9	Loss	104.6
chr8	133963488	134106667	RP11-184M21	Loss	134
chr8	135877595	136056870	RP11-21H16	Loss	135.9
chr9	125000	275000	RP1-43N6	Gain and Loss	0.2
chr9	615147	812246	RP11-130C19	Loss	0.6
chr9	15220015	15401786	RP11-490C5	Gain	15.3
chr9	17136368	17298494	RP11-340N12	Loss	17.1
chr9	85711859	85882093	RP11-65B23	Gain	85.7
chr9	102625000	102775000	RP11-363G1	Loss	102.7
chr9	111201836	111308999	RP11-9H12	Gain and Loss	111.2
chr9	131883477	132062605	RP11-153P4	Gain	131.9
chr9	134608121	134796583	AL592301.14	Loss	134.6
chr9	136122000	136272000	RP1-112N13	Loss	0
chrUn_random	1531492	1702952	RP11-338O10	Gain	204.6
chrX	23633738	23825881	RP11-79B3	Loss	23.6
chrX	28542941	28595299	RP6-27C10	Gain and Loss	28.5
chrX	32570330	32704219	AL031643.1	Gain and Loss	32.6
chrX	56063741	56144352	RP3-323P24	Loss	56.1
chrX	72070791	72158021	RP13-36G14	Loss	72.1
chrX	76064846	76208376	RP4-570L12	Gain	76.1
chrX	78222214	78317076	RP11-217H19	Loss	78.2
chrX	81575249	81663040	RP1-223D17	Loss	81.6
chrX	81938891	82112651	RP11-326A14	Gain	81.9
chrX	91017895	91195617	RP11-156J23	Loss	91
chrX	103646903	103700088	RP1-315B17	Loss	103.6
chrX	104938297	105047762	RP1-75H8	Loss	104.9
chrX	120749587	120913351	RP6-64P14	Loss	120.7
chrX	124288112	124438489	RP11-79C15	Gain	124.3
chrX	132841292	132908493	RP4-809E13	Loss	132.8
chrX	139674280	139798777	RP6-232G24	Gain and Loss	139.7